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1

Assessing the fit of site-occupancy models

Darryl I. MacKenzie, Larissa L. Bailey

Journal:

Journal of Agricultural, Biological, and Environmental Statistics

Year:

2004

Language:

english

File:

PDF, 203 KB

english, 2004

2

How many to sample? Statistical guidelines for monitoring animal welfare outcomes

Hampton, Jordan O., MacKenzie, Darryl I., Forsyth, David M., Serrano Ferron, Emmanuel

Journal:

Year:

2019

Language:

english

File:

PDF, 2.52 MB

english, 2019

3

ESTIMATING SITE OCCUPANCY RATES WHEN DETECTION PROBABILITIES ARE LESS THAN ONE

MacKenzie, Darryl I., Nichols, James D., Lachman, Gideon B., Droege, Sam, Andrew Royle, J., Langtimm, Catherine A.

Journal:

Year:

2002

Language:

english

File:

PDF, 161 KB

english, 2002

4

Use of Bayesian population viability analysis to assess multiple management decisions in the recovery programme for the Endangered takahe Porphyrio hochstetteri

Hegg, Danilo, MacKenzie, Darryl I., Jamieson, Ian G.

Journal:

Year:

2013

Language:

english

File:

PDF, 407 KB

english, 2013

5

Modeling species occurrence dynamics with multiple states and imperfect detection

MacKenzie, Darryl I., Nichols, James D., Seamans, Mark E., Gutiérrez, R. J.

Journal:

Year:

2009

Language:

english

File:

PDF, 362 KB

english, 2009

6

Negative Binomial Models for Abundance Estimation of Multiple Closed Populations

Mark S. Boyce, Darryl I. MacKenzie, Bryan F. J. Manly, Mark A. Haroldson and David Moody

Journal:

Journal of Wildlife Management

Year:

2001

Language:

english

File:

PDF, 2.24 MB

english, 2001

7

Tree survival and growth responses in the aftermath of a strong earthquake

Allen, Robert B., MacKenzie, Darryl I., Bellingham, Peter J., Wiser, Susan K., Arnst, Elise A., Coomes, David A., Hurst, Jennifer M.

Journal:

Journal of Ecology

Year:

2019

Language:

english

File:

PDF, 1.56 MB

english, 2019

8

Estimating Site Occupancy Rates When Detection Probabilities Are Less Than One

Darryl I. MacKenzie, James D. Nichols, Gideon B. Lachman, Sam Droege, J. Andrew Royle and Catherine A. Langtimm

Journal:

Year:

2002

Language:

english

File:

PDF, 366 KB

english, 2002

9

Designing Occupancy Studies: General Advice and Allocating Survey Effort

Darryl I. MacKenzie and J. Andrew Royle

Journal:

Journal of Applied Ecology

Year:

2005

Language:

english

File:

PDF, 2.29 MB

english, 2005

10

ESTIMATING SITE OCCUPANCY, COLONIZATION, AND LOCAL EXTINCTION WHEN A SPECIES IS DETECTED IMPERFECTLY

MacKenzie, Darryl I., Nichols, James D., Hines, James E., Knutson, Melinda G., Franklin, Alan B.

Journal:

Year:

2003

Language:

english

File:

PDF, 102 KB

english, 2003

11

Modelling skewed data with many zeros: A simple approach combining ordinary and logistic regression

David Fletcher, Darryl MacKenzie, Eduardo Villouta

Journal:

Environmental and Ecological Statistics

Year:

2005

Language:

english

File:

PDF, 307 KB

english, 2005

12

Assessing the Fit of Site-Occupancy Models

Darryl I. MacKenzie and Larissa L. Bailey

Journal:

Journal of Agricultural, Biological, and Environmental Statistics

Year:

2004

Language:

english

File:

PDF, 2.09 MB

english, 2004

13

The use of photographic rates to estimate densities of tigers and other cryptic mammals: a comment on misleading conclusions

Christopher S. Jennelle, Michael C. Runge, Darryl I. MacKenzie

Journal:

Animal Conservation

Year:

2002

Language:

english

File:

PDF, 34 KB

english, 2002

14

Spatial Patterns of Breeding Success of Grizzly Bears Derived from Hierarchical Multistate Models

FISHER, JASON T., WHEATLEY, MATTHEW, MACKENZIE, DARRYL

Journal:

Conservation Biology

Year:

2014

Language:

english

File:

PDF, 933 KB

english, 2014

15

Sampling Design Trade-Offs in Occupancy Studies with Imperfect Detection: Examples and Software

Larissa L. Bailey, James E. Hines, James D. Nichols and Darryl I. MacKenzie

Journal:

Ecological Applications

Year:

2007

Language:

english

File:

PDF, 1.44 MB

english, 2007

16

Population dynamics of invading freshwater fish: common carp (Cyprinus carpio) in the Murray-Darling Basin, Australia

Forsyth, David M., Koehn, John D., MacKenzie, Darryl I., Stuart, Ivor G.

Journal:

Biological Invasions

Year:

2013

Language:

english

File:

PDF, 699 KB

english, 2013

17

Monitoring Golden-Cheeked Warblers on Private Lands in Texas

BRET A. COLLIER, MICHAEL L. MORRISON, SHANNON L. FARRELL, ANDREW J. CAMPOMIZZI, JERROD A. BUTCHER, K. BRIAN HAYS, DARRYL I. MACKENZIE, R. NEAL WILKINS

Journal:

Journal of Wildlife Management

Year:

2010

Language:

english

File:

PDF, 431 KB

english, 2010

18

Advances and applications of occupancy models

Bailey, Larissa L., MacKenzie, Darryl I., Nichols, James D., Cooch, Evan

Journal:

Methods in Ecology and Evolution

Year:

2014

Language:

english

File:

PDF, 254 KB

english, 2014

19

Modeling Species Occurrence Dynamics with Multiple States and Imperfect Detection

Darryl I. MacKenzie, James D. Nichols, Mark E. Seamans and R. J. Gutiérrez

Journal:

Year:

2009

Language:

english

File:

PDF, 1.84 MB

english, 2009

20

Monitoring carnivore populations at the landscape scale: occupancy modelling of tigers from sign surveys

Kota Ullas Karanth, Arjun M. Gopalaswamy, Narayanarao Samba Kumar, Srinivas Vaidyanathan, James D. Nichols, Darryl I. MacKenzie

Journal:

Journal of Applied Ecology

Year:

2011

Language:

english

File:

PDF, 416 KB

english, 2011

21

Getting the biggest bang for our conservation buck

Darryl I. MacKenzie

Journal:

Trends in Ecology & Evolution

Year:

2009

Language:

english

File:

PDF, 107 KB

english, 2009

22

FORUM: Ecologists need robust survey designs, sampling and analytical methods

Hayward, Matt W., Boitani, Luigi, Burrows, Neil D., Funston, Paul J., Karanth, K. Ullas, MacKenzie, Darryl I., Pollock, Ken H., Yarnell, Richard W., Frair, Jacqueline

Journal:

Journal of Applied Ecology

Year:

2015

Language:

english

File:

PDF, 109 KB

english, 2015

23

Graphical diagnostics for occupancy models with imperfect detection

Warton, David I., Stoklosa, Jakub, Guillera-Arroita, Gurutzeta, MacKenzie, Darryl I., Welsh, Alan H., O'Hara, Robert B.

Journal:

Methods in Ecology and Evolution

Year:

2017

Language:

english

File:

PDF, 2.94 MB

english, 2017

24

Simultaneous modeling of habitat suitability, occupancy, and relative abundance: African elephants in Zimbabwe

Julien Martin, Simon Chamaillé-Jammes, James D. Nichols, Hervé Fritz, James E. Hines, Christopher J. Fonnesbeck, Darryl I. MacKenzie and Larissa L. Bailey

Journal:

Ecological Applications

Year:

2010

Language:

english

File:

PDF, 1.84 MB

english, 2010

25

An integrated model of habitat and species occurrence dynamics

Darryl I. MacKenzie, Larissa L. Bailey, James E. Hines, James D. Nichols

Journal:

Methods in Ecology and Evolution

Year:

2011

Language:

english

File:

PDF, 328 KB

english, 2011

26

Are footprint tracking tunnels suitable for monitoring giant weta (Orthoptera: Anostostomatidae)? Abundance, distribution and movement in relation to tracking rates

Corinne Watts, Ian Stringer, Danny Thornburrow, Darryl MacKenzie

Journal:

Journal of Insect Conservation

Year:

2011

Language:

english

File:

PDF, 552 KB

english, 2011

27

Altered Bone Development and an Increase in FGF-23 Expression in Enpp1−/− Mice

Mackenzie, Neil Charles Wallace, Zhu, Dongxing, Milne, Elspeth M., van 't Hof, Rob, Martin, Aline, Quarles, Darryl Leigh, Millán, José Luis, Farquharson, Colin, MacRae, Vicky Elisabeth, Schneider, Mar

Journal:

Year:

2012

Language:

english

File:

PDF, 534 KB

english, 2012

28

Accounting for non-independent detection when estimating abundance of organisms with a Bayesian approach

Julien Martin, J. Andrew Royle, Darryl I. Mackenzie, Holly H. Edwards, Marc Kéry, Beth Gardner

Journal:

Methods in Ecology and Evolution

Year:

2011

Language:

english

File:

PDF, 157 KB

english, 2011

29

Model-based approaches to deal with detectability: a comment on Hutto (2016)

Marques, Tiago A., Thomas, Len, Kéry, Marc, Buckland, Steve T., Borchers, David L., Rexstad, Eric, Fewster, Rachel M., MacKenzie, Darryl I., Royle, J. Andrew, Guillera-Arroita, Gurutzeta, Handel, Coll

Journal:

Ecological Applications

Year:

2017

Language:

english

File:

PDF, 132 KB

english, 2017

30

Age- and sex-specific survival estimates incorporating tag loss for New Zealand sea lions , Phocarctos hookeri

B. Louise Chilvers and Darryl I. MacKenzie

Journal:

Journal of Mammalogy

Year:

2010

Language:

english

File:

PDF, 1.74 MB

english, 2010

31

What Are the Issues with Presence-Absence Data for Wildlife Managers?

Darryl I. MacKenzie

Journal:

Journal of Wildlife Management

Year:

2005

Language:

english

File:

PDF, 2.58 MB

english, 2005

32

Designing occupancy studies: general advice and allocating survey effort

DARRYL I. MACKENZIE, J. ANDREW ROYLE

Journal:

Journal of Applied Ecology

Year:

2005

Language:

english

File:

PDF, 130 KB

english, 2005

33

Modeling the Probability of Resource Use: The Effect of, and Dealing with, Detecting a Species Imperfectly

DARRYL I. MACKENZIE

Journal:

Journal of Wildlife Management

Year:

2006

Language:

english

File:

PDF, 119 KB

english, 2006

34

WHAT ARE THE ISSUES WITH Presence-Absence DATA FOR WILDLIFE MANAGERS?

DARRYL I. MacKENZIE

Journal:

Journal of Wildlife Management

Year:

2005

Language:

english

File:

PDF, 141 KB

english, 2005

35

OCCUPANCY ESTIMATION AND MODELING WITH MULTIPLE STATES AND STATE UNCERTAINTY

Nichols, James D., Hines, James E., Mackenzie, Darryl I., Seamans, Mark E., Gutiérrez, R. J.

Journal:

Year:

2007

Language:

english

File:

PDF, 107 KB

english, 2007

36

SAMPLING DESIGN TRADE-OFFS IN OCCUPANCY STUDIES WITH IMPERFECT DETECTION: EXAMPLES AND SOFTWARE

Bailey, Larissa L., Hines, James E., Nichols, James D., MacKenzie, Darryl I.

Journal:

Ecological Applications

Year:

2007

Language:

english

File:

PDF, 143 KB

english, 2007

37

Modeling the Probability of Resource Use: The Effect of, and Dealing with, Detecting a Species Imperfectly

Darryl I. MacKenzie

Journal:

Journal of Wildlife Management

Year:

2006

Language:

english

File:

PDF, 2.31 MB

english, 2006

38

IMPROVING INFERENCES IN POPULATION STUDIES OF RARE SPECIES THAT ARE DETECTED IMPERFECTLY

MacKenzie, Darryl I., Nichols, James. D., Sutton, Nicole, Kawanishi, Kae, Bailey, Larissa L.

Journal:

Year:

2005

Language:

english

File:

PDF, 91 KB

english, 2005

39

Occupancy Estimation and Modeling with Multiple States and State Uncertainty

James D. Nichols, James E. Hines, Darryl I. Mackenzie, Mark E. Seamans and R. J. Gutiérrez

Journal:

Year:

2007

Language:

english

File:

PDF, 1.24 MB

english, 2007

40

Coâoccurrence of bobcats, coyotes, and ocelots in Texas

Lombardi, Jason V., MacKenzie, Darryl I., Tewes, Michael E., PerottoâBaldivieso, Humberto L., Mata, JosÃ© M., Campbell, Tyler A.

Journal:

Ecology and Evolution

Year:

2020

File:

PDF, 2.25 MB

2020

41

WAS IT THERE? DEALING WITH IMPERFECT DETECTION FOR SPECIES PRESENCE/ABSENCE DATA

Darryl I. Mackenzie

Journal:

Australian & New Zealand Journal of Statistics

Year:

2005

Language:

english

File:

PDF, 174 KB

english, 2005

42

Investigating Species Co-Occurrence Patterns When Species Are Detected Imperfectly

Darryl I. MacKenzie, Larissa L. Bailey and James D. Nichols

Journal:

Journal of Animal Ecology

Year:

2004

Language:

english

File:

PDF, 2.04 MB

english, 2004

43

Estimation of Animal Abundance and Related Parameters || Randomization Tests for Time Effects and Heterogeneity in Capture Probabilities for Closed Populations

Darryl I. MacKenzie and Bryan F. J. Manly

Journal:

Journal of Agricultural, Biological, and Environmental Statistics

Year:

2001

Language:

english

File:

PDF, 1.12 MB

english, 2001

44

Seeking a second opinion: uncertainty in disease ecology

Brett T. McClintock, James D. Nichols, Larissa L. Bailey, Darryl I. MacKenzie, William. L. Kendall, Alan B. Franklin

Journal:

Ecology Letters

Year:

2010

Language:

english

File:

PDF, 471 KB

english, 2010

45

HOW SHOULD DETECTION PROBABILITY BE INCORPORATED INTO ESTIMATES OF RELATIVE ABUNDANCE?

MacKenzie, Darryl I., Kendall, William L.

Journal:

Year:

2002

Language:

english

File:

PDF, 170 KB

english, 2002

46

Estimating Site Occupancy, Colonization, and Local Extinction When a Species Is Detected Imperfectly

Darryl I. MacKenzie, James D. Nichols, James E. Hines, Melinda G. Knutson and Alan B. Franklin

Journal:

Year:

2003

Language:

english

File:

PDF, 1.50 MB

english, 2003

47

Implementation of an occupancy-based monitoring protocol for a widespread and cryptic species, the New England cottontail (Sylvilagus transitionalis)

Shea, Colin P., Eaton, Mitchell J., MacKenzie, Darryl I.

Journal:

CSIRO Wildlife Research

Year:

2019

File:

PDF, 419 KB

2019

48

A cumulative sum type of method for environmental monitoring

Bryan F. J. Manly, Darryl Mackenzie

Journal:

Year:

2000

Language:

english

File:

PDF, 163 KB

english, 2000

49

Investigating species co-occurrence patterns when species are detected imperfectly

Darryl I. MacKenzie, Larissa L. Bailey, James. D. Nichols

Journal:

Journal of Animal Ecology

Year:

2004

Language:

english

File:

PDF, 192 KB

english, 2004

50

The biology of Placostylus ambagiosus (Pulmonata: Bulimulidae) in New Zealand: Part 2. Population changes, growth, mortality and life expectancy

Stringer, Ian A. N., Parrish, G. Richard, Sherley, Greg H., MacKenzie, Darryl I.

Journal:

Molluscan Research

Year:

2014

Language:

english

File:

PDF, 1.01 MB

english, 2014

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